Q. Sun
Association of monocyte chemoattractant protein-1 rs1024611 and telomerase rs2736100 polymorphisms with susceptibility to pulmonary tuberculosis in Han Chinese population
Pulmonary tuberculosis (PTB) is caused by Mycobacterium tuberculosis infection and accumulated evidence reveals the genetic context of its infection phenotypes. Monocyte chemoattractant protein-1 (MCP-1) rs1024611 variant is shown to be associated with PTB susceptibility in some studies, but significant disparities exist. In addition, telomerase plays a key role in .. Read More»
Genet. Mol. Res. 16(3): gmr16039697
DOI: 10.4238/gmr16039697
Transcriptomic analysis of Camellia ptilophylla and identification of genes associated with flavonoid and caffeine biosynthesis
Camellia ptilophylla, or cocoa tea, is naturally decaffeinated and its predominant catechins and purine alkaloids are trans-catechins and theobromine Regular tea [Camellia sinensis (L.) O. Ktze.] is evolutionarily close to cocoa tea and produces cis-catechins and caffeine. Here, the transcriptome of C. ptilophylla was sequenced using the 101-bp paired-end technique. The quality of the raw data .. Read More»
Genet. Mol. Res. 14(4): 2015.December.28.22
DOI: 10.4238/2015.December.28.22
Development and characterization of microsatellite markers for the walking goby (Scartelaos viridis; Gobiidae)
Scartelaos viridis (walking goby) is a small edible fish that inhabits warm inshore environments. To provide molecular information of S. viridis, we developed and characterized microsatellite markers for this species. Using (CA)15-enriched genomic libraries of Scartelaos viridis, 44 positive clones were sequenced; 34 sequences contained multiple repeat motifs (di-, .. Read More»
Genet. Mol. Res. 10(1): vol10-1gmr1015
DOI: 10.4238/vol10-1gmr1015
IL-16 rs4778889 polymorphism contribution to the development of renal cell cancer in a Chinese population
IL-16 plays an important role in affect the secretion of tumor-related inflammatory cytokines. We aimed to assess the role of interleukin-16 (IL-16) rs4778889 T/C and rs11556218 T/G polymorphisms in the occurrence of renal cell cancer (RCC). This study is composed of 274 RCC patients and 274 control subjects. Genotyping of polymorphisms was performed using polymeras.. Read More»
Genet. Mol. Res. 15(2): gmr.15027553
DOI: 10.4238/gmr.15027553
DNA barcoding of populations of Fallopia multiflora, an indigenous herb in China
Fallopia multiflora, locally known as Heshouwu, is one of the most important and widely used Chinese medicinal herbs. However, there is still considerable confusion concerning its different provenances. DNA barcoding is a recent aid to taxonomic identification and uses a short standardized DNA region to discriminate plant species. We assessed the applicability of 4 candidate DNA barcodes (matK,.. Read More»
Genet. Mol. Res. 12(3): 2013.September.27.9
DOI: 10.4238/2013.September.27.9
Rapid isolation and characterization of polymorphic microsatellite loci in the mud crab, Scylla paramamosain (Portunidae)
Scylla paramamosain is a widespread and commercially important species of coastal marine crab. We identified 13 polymorphic microsatellite loci from a genome library constructed with 5êÂ?Â?-anchored PCR method. Thirty-two S. paramamosain from the East China Sea were used to analyze the characteristics of these loci. The number of alleles per locus ranged from 3 to 8, with a mean of 5.923. Obse.. Read More»
Genet. Mol. Res. 11(2): 2012.May.21.7
DOI: 10.4238/2012.May.21.7
A two-step method for identification of the Chinese glutinous rice Suyunuo, based on ISSR-SCAR and allele-specific markers
Suyunuo is a valuable glutinous rice variety cultivated mainly in the Lake Taihu area of China. Historically, Suyunuo was presented to emperors as a tribute, and, still today, enjoys a great reputation in China. This study aimed to develop a unique, specific molecular marker for the identification of Suyunuo rice. Polymerase chain reaction (PCR) amplification of int.. Read More»
Genet. Mol. Res. 15(4): gmr.15048663
DOI: 10.4238/gmr.15048663
Isolation and characterization of polymorphic microsatellite loci from aerial yam (Dioscorea bulbifera L.)
Dioscorea bulbifera L. is widely distributed in pantropical regions along the equator. The taxonomic treatment of this species is ambiguous due to its extreme polymorphic morphological characters. In order to provide tools to facilitate the study of genetic diversity, population structure, patterns of gene flow, and the mating system of this species, and to assess i.. Read More»
Genet. Mol. Res. 13(1): http://dx.doi.org/2014.March.12.3
DOI: http://dx.doi.org/10.4238/2014.March.12.3
Isolation and characterization of microsatellite DNA loci for wild Brassica juncea (Brassicaceae)
Wild Brassica juncea is a widespread weed in China with increasingly great impact on the yield of many crops. This study aimed to develop microsatellite markers for assessing the genetic diversity and population genetic structure of B. juncea, and to provide basic information for biological and chemical control of the weed. The compound microsatellite marker technique was used to develop marker.. Read More»
Genet. Mol. Res. 12(4): 2013.November.8.1
DOI: 10.4238/2013.November.8.1
Development and characterization of microsatellite markers for the lizardfish known as the Bombay duck, Harpadon nehereus (Synodontidae)
The Bombay duck, or bummalo (Harpadon nehereus), is a lizardfish native to the Arabian sea, but also common in the China sea. It is normally dried and salted before consumption and export. To provide molecular information on this economically important fish species, we developed and characterized microsatellite markers. Ninety positive clones from the (CA)15-enriche.. Read More»
Genet. Mol. Res. 10(3): vol10-3gmr1045
DOI: 10.4238/vol10-3gmr1045
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